Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.33 | 0.85 |
Trophozoite | possibly expressed | 0.25 | 0.88 |
Schizont | not expressed | 0.11 | 0.93 |
Gametocyte | not expressed | 1.21 | 0.45 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0214300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 0.214 | #Insertions: 12
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O96223
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 26 | 100 | 53 | 105 |
disruptive | 232 | 453 | 200 | 481 |
missense | 129 | 332 | 146 | 353 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 39 | 187 | 68 | 121 |
disruptive | 352 | 793 | 299 | 637 |
missense | 209 | 566 | 222 | 404 |
PlasmoDB Total SNPs: 932
Non-coding: 216 | Synonymous: 340 | Nonsynonymous: 376 | Stop Codon: 0
Protein Length: 2500 | Molecular Weight (kDa): 293.887
UniProt ID(s): O96223
PDB ID(s): None
Isoelectric Point: 6.95
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
9804551 | Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Tettelin H, ..., Hoffman SL | 10.1126/science.282.5391.1126 |
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |