Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.18 | 0.91 |
Trophozoite | not expressed | 0.38 | 0.77 |
Schizont | not expressed | 0.19 | 0.87 |
Gametocyte | not expressed | 0.39 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0304300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 0.257 | #Insertions: 15
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0402900)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O97230
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 62 | 39 | 69 |
disruptive | 40 | 198 | 144 | 264 |
missense | 36 | 189 | 137 | 228 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 126 | 53 | 92 |
disruptive | 94 | 470 | 213 | 514 |
missense | 72 | 383 | 179 | 294 |
PlasmoDB Total SNPs: 171
Non-coding: 32 | Synonymous: 93 | Nonsynonymous: 45 | Stop Codon: 1
Protein Length: 1429 | Molecular Weight (kDa): 172.855
UniProt ID(s): O97230
PDB ID(s): None
Isoelectric Point: 9.46
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |