Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.24 | 0.89 |
| Trophozoite | expressed | 1.38 | 0.37 |
| Schizont | possibly expressed | 0.68 | 0.65 |
| Gametocyte | possibly expressed | 1.66 | 0.30 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0305100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.219 | #Insertions: 5
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 59 | 196 | 113 | 239 |
| disruptive | 247 | 824 | 393 | 850 |
| missense | 129 | 618 | 324 | 684 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 88 | 387 | 147 | 278 |
| disruptive | 471 | 1505 | 536 | 1084 |
| missense | 242 | 1134 | 426 | 786 |
PlasmoDB Total SNPs: 543
Non-coding: 0 | Synonymous: 300 | Nonsynonymous: 243 | Stop Codon: 0
Protein Length: 3978 | Molecular Weight (kDa): 475.132
UniProt ID(s): O97236
PDB ID(s): None
Isoelectric Point: 8.71
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |