Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.15 | 0.93 |
Trophozoite | possibly expressed | 0.72 | 0.64 |
Schizont | not expressed | 0.12 | 0.93 |
Gametocyte | not expressed | 1.35 | 0.45 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0307900
Resistome Missense Mutations: L2968F
Resistome Compounds with Missense Mutations: GNF-Pf-3600
Resistome # Samples with Disruptive Mutations: 7 (6 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.196 | #Insertions: 24
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0406200)
Modification: Disrupted | RMgm-4209
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 36 | 159 | 102 | 184 |
disruptive | 254 | 625 | 292 | 653 |
missense | 160 | 486 | 252 | 527 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 58 | 278 | 126 | 215 |
disruptive | 406 | 1043 | 435 | 829 |
missense | 242 | 814 | 368 | 624 |
PlasmoDB Total SNPs: 771
Non-coding: 202 | Synonymous: 244 | Nonsynonymous: 325 | Stop Codon: 0
Protein Length: 3724 | Molecular Weight (kDa): 448.207
UniProt ID(s): O77320
PDB ID(s): None
Isoelectric Point: 6.55
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |