Product Description: parasite-infected erythrocyte surface protein
SignalP Peptide: MKVGIIFFCLFFFVVLG
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0009986 | cell surface |
Component | GO:0020002 | host cell plasma membrane |
Component | GO:0005634 | nucleus |
Component | GO:0085026 | tubovesicular membrane network |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.16 | 0.92 |
Trophozoite | expressed | 1.04 | 0.56 |
Schizont | expressed | 0.88 | 0.65 |
Gametocyte | expressed | 0.38 | 0.78 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0310400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.192 | MFS: -2.732 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O77361
"Best" AlphaFill ligand hit: UMP (2'-deoxyuridine 5'-monophosphate, Local RMSD=0.14) with 6KPR (Global RMSD=20.42)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 46 | 27 | 59 |
disruptive | 41 | 108 | 59 | 155 |
missense | 27 | 84 | 43 | 120 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 10 | 103 | 44 | 75 |
disruptive | 72 | 260 | 140 | 300 |
missense | 42 | 189 | 101 | 194 |
PlasmoDB Total SNPs: 126
Non-coding: 28 | Synonymous: 48 | Nonsynonymous: 47 | Stop Codon: 3
Protein Length: 1294 | Molecular Weight (kDa): 154.089
UniProt ID(s): O77361
PDB ID(s): None
Isoelectric Point: 4.93
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR003378 | Fringe-like |
PFam | PF02434 | Fringe-like |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
15287581 | Proteomics approach reveals novel proteins on the surface of malaria-infectederythrocytes. | Florens L, Liu X, ..., Wu Y | https://pubmed.ncbi.nlm.nih.gov/15287581/ |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |
18551176 | The malaria secretome: from algorithms to essential function in blood stageinfection. | van Ooij C, Tamez P, ..., Haldar K | https://pubmed.ncbi.nlm.nih.gov/18551176/ |
30379851 | Identification of Plasmodium falciparum nuclear proteins by mass spectrometry andproposed protein annotation. | Briquet S, Ourimi A, ..., Vaquero C | 10.1371/journal.pone.0205596 |