Product Description: eukaryotic translation initiation factor 3 subunit K, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0005852 | eukaryotic translation initiation factor 3 complex |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | nd | nd |
| Trophozoite | possibly expressed | nd | nd |
| Schizont | not expressed | nd | nd |
| Gametocyte | not expressed | nd | nd |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0310600.2
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.211 | MFS: -3.232 | #Insertions: 0
PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_0408600)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0408600)
Modification: Disrupted | RMgm-1880
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q9NFE6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_103049
Most Similar Human Ortholog: K7ES31
TM-align score: 0.82 | RMSD: 2.29
Seq Identity: 0.20 | Length: 132 / 235
All Human Orthologs (OrthoMCL):
| Gene ID | Description |
|---|---|
| ENSG00000178982 | eukaryotic translation initiation factor 3 subunit K |
| ENSG00000282986 | eukaryotic translation initiation factor 3 subunit K |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 10 | 6 | 11 |
| disruptive | 2 | 22 | 6 | 21 |
| missense | 2 | 21 | 6 | 18 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 21 | 10 | 12 |
| disruptive | 3 | 43 | 24 | 48 |
| missense | 2 | 34 | 23 | 30 |
PlasmoDB Total SNPs: 104
Non-coding: 74 | Synonymous: 21 | Nonsynonymous: 9 | Stop Codon: 0
Protein Length: 235 | Molecular Weight (kDa): 28.035
UniProt ID(s): Q9NFE6
PDB ID(s): None
Isoelectric Point: 5.69
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR009374 | Eukaryotic translation initiation factor 3 subunit K |
| InterPro | IPR016024 | Armadillo-type fold |
| InterPro | IPR033464 | CSN8/PSMD8/EIF3K |
| InterPro | IPR036390 | Winged helix DNA-binding domain superfamily |
| PFam | PF10075 | CSN8/PSMD8/EIF3K |
| Superfamily | SSF46785 | Winged helix DNA-binding domain superfamily |
| Superfamily | SSF48371 | Armadillo-type fold |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |