Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 8
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.08 | 0.96 |
Trophozoite | possibly expressed | 0.21 | 0.89 |
Schizont | possibly expressed | 0.37 | 0.80 |
Gametocyte | not expressed | 0.74 | 0.64 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0315300
Resistome Missense Mutations: Y485D
Resistome Compounds with Missense Mutations: AN13762, AN13956
Resistome # Samples with Disruptive Mutations: 5 (5 missense, 5 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.563 | #Insertions: 2
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0413000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0413000)
Modification: Disrupted | RMgm-1899
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O97276
"Best" AlphaFill ligand hit: CLQ (n4-(7-chloro-quinolin-4-yl)-n1,n1-diethyl-pentane-1,4-diamine, Local RMSD=6.80) with 7DI7 (Global RMSD=42.64)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 46 | 21 | 73 |
disruptive | 36 | 160 | 93 | 244 |
missense | 30 | 149 | 85 | 214 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 87 | 45 | 94 |
disruptive | 92 | 369 | 193 | 384 |
missense | 54 | 297 | 159 | 281 |
PlasmoDB Total SNPs: 328
Non-coding: 190 | Synonymous: 78 | Nonsynonymous: 60 | Stop Codon: 0
Protein Length: 1767 | Molecular Weight (kDa): 217.255
UniProt ID(s): O97276
PDB ID(s): None
Isoelectric Point: 9.97
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |