Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MQYLLLYILLSICSYNILS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 0.99 |
Trophozoite | not expressed | 0.01 | 0.99 |
Schizont | not expressed | 0.01 | 0.99 |
Gametocyte | expressed | 0.70 | 0.71 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0318000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.611 | MFS: -2.268 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0807200)
Modification: Disrupted | RMgm-2326
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O77378
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 7 | 5 | 9 |
disruptive | 3 | 28 | 16 | 34 |
missense | 3 | 28 | 16 | 33 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 13 | 10 | 10 |
disruptive | 7 | 53 | 20 | 45 |
missense | 6 | 50 | 19 | 37 |
PlasmoDB Total SNPs: 10
Non-coding: 0 | Synonymous: 4 | Nonsynonymous: 6 | Stop Codon: 0
Protein Length: 202 | Molecular Weight (kDa): 24.412
UniProt ID(s): O77378
PDB ID(s): None
Isoelectric Point: 8.97
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |