Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.63 | 0.70 |
Trophozoite | expressed | 0.55 | 0.68 |
Schizont | expressed | 0.41 | 0.75 |
Gametocyte | expressed | 0.71 | 0.61 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0318300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.996 | MFS: -2.963 | #Insertions: 2
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0806900)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0806900)
Modification: Disrupted | RMgm-2323
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O77374
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 34 | 21 | 60 |
disruptive | 43 | 101 | 41 | 124 |
missense | 34 | 85 | 40 | 104 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 85 | 30 | 60 |
disruptive | 78 | 213 | 95 | 210 |
missense | 54 | 160 | 75 | 158 |
PlasmoDB Total SNPs: 253
Non-coding: 87 | Synonymous: 90 | Nonsynonymous: 76 | Stop Codon: 0
Protein Length: 1119 | Molecular Weight (kDa): 132.983
UniProt ID(s): O77374
PDB ID(s): None
Isoelectric Point: 6.61
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |