Product Description: coiled-coil domain-containing protein CCDC148/CCDC112, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | not expressed | 0.02 | 0.99 |
Schizont | not expressed | 0.05 | 0.96 |
Gametocyte | not expressed | 0.55 | 0.73 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0318400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.993 | MFS: -2.155 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O77373
"Best" AlphaFill ligand hit: HEM (heme, Local RMSD=3.62) with 4I8V (Global RMSD=20.93)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 25 | 17 | 36 |
disruptive | 17 | 77 | 34 | 105 |
missense | 17 | 76 | 34 | 93 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 50 | 26 | 36 |
disruptive | 42 | 155 | 83 | 145 |
missense | 36 | 126 | 68 | 117 |
PlasmoDB Total SNPs: 279
Non-coding: 218 | Synonymous: 43 | Nonsynonymous: 18 | Stop Codon: 0
Protein Length: 591 | Molecular Weight (kDa): 70.84
UniProt ID(s): O77373
PDB ID(s): None
Isoelectric Point: 5.34
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR039902 | Coiled-coil domain-containing protein CCDC148/CCDC112 |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |