Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.21 | 0.89 |
Trophozoite | expressed | 0.28 | 0.82 |
Schizont | expressed | 0.11 | 0.92 |
Gametocyte | expressed | 0.20 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0319900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.156 | MFS: -2.675 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O97279
"Best" AlphaFill ligand hit: OEY (ca-mn4-o6 cluster, Local RMSD=0.04) with 5WS6 (Global RMSD=17.66)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 17 | 10 | 21 |
disruptive | 1 | 21 | 15 | 32 |
missense | 1 | 18 | 15 | 29 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 31 | 16 | 19 |
disruptive | 4 | 52 | 38 | 83 |
missense | 2 | 43 | 33 | 56 |
PlasmoDB Total SNPs: 65
Non-coding: 53 | Synonymous: 9 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 314 | Molecular Weight (kDa): 36.143
UniProt ID(s): O97279
PDB ID(s): None
Isoelectric Point: 4.44
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |