Product Description: CPW-WPC family protein
SignalP Peptide: MKFSFFSVVICFVILAYS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.04 | 0.98 |
Trophozoite | possibly expressed | 0.08 | 0.95 |
Schizont | possibly expressed | 0.04 | 0.98 |
Gametocyte | expressed | 1.09 | 0.58 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0320200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.188 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1346300)
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_1218300)
Modification: Tagged | RMgm-4860
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H481
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 22 | 6 | 35 |
disruptive | 36 | 81 | 41 | 81 |
missense | 14 | 43 | 28 | 57 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 44 | 16 | 36 |
disruptive | 79 | 136 | 56 | 121 |
missense | 30 | 80 | 40 | 76 |
PlasmoDB Total SNPs: 90
Non-coding: 24 | Synonymous: 34 | Nonsynonymous: 32 | Stop Codon: 0
Protein Length: 583 | Molecular Weight (kDa): 68.929
UniProt ID(s): C0H481
PDB ID(s): None
Isoelectric Point: 7.61
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR006387 | CPW-WPC domain |
PFam | PF09717 | CPW-WPC domain |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |