Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020007 | apical complex |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.03 | 0.98 |
Schizont | not expressed | 0.06 | 0.96 |
Gametocyte | not expressed | 0.38 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0322200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.693 | MFS: -0.397 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1216300)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1216300)
Modification: Tagged | RMgm-4954
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O97294
"Best" AlphaFill ligand hit: ABH (2(s)-amino-6-boronohexanoic acid, Local RMSD=0.71) with 3MMR (Global RMSD=13.68)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 36 | 24 | 57 |
disruptive | 17 | 81 | 58 | 127 |
missense | 17 | 80 | 57 | 117 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 78 | 41 | 55 |
disruptive | 32 | 206 | 91 | 148 |
missense | 29 | 180 | 78 | 110 |
PlasmoDB Total SNPs: 234
Non-coding: 170 | Synonymous: 43 | Nonsynonymous: 21 | Stop Codon: 0
Protein Length: 753 | Molecular Weight (kDa): 91.02
UniProt ID(s): O97294
PDB ID(s): None
Isoelectric Point: 9.25
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | SSF57997 | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
33705380 | Molecular characterization of the conoid complex in Toxoplasma reveals itsconservation in all apicomplexans, including Plasmodium species. | Koreny L, Zeeshan M, ..., Waller RF | 10.1371/journal.pbio.3001081 |