Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 7
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.86 | 0.62 |
Trophozoite | expressed | 1.07 | 0.47 |
Schizont | possibly expressed | 0.52 | 0.72 |
Gametocyte | not expressed | 1.04 | 0.49 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0322700
Resistome Missense Mutations: S3000F
Resistome Compounds with Missense Mutations: BI-2536
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 2 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.14 | MFS: -2.941 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 43 | 149 | 70 | 148 |
disruptive | 163 | 475 | 210 | 548 |
missense | 93 | 386 | 187 | 467 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 74 | 257 | 111 | 177 |
disruptive | 300 | 936 | 359 | 823 |
missense | 159 | 742 | 278 | 540 |
PlasmoDB Total SNPs: 624
Non-coding: 68 | Synonymous: 326 | Nonsynonymous: 230 | Stop Codon: 0
Protein Length: 3096 | Molecular Weight (kDa): 372.686
UniProt ID(s): O97298
PDB ID(s): None
Isoelectric Point: 9.3
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |