Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.01 | 1.00 |
| Trophozoite | not expressed | 0.05 | 0.97 |
| Schizont | possibly expressed | 0.05 | 0.97 |
| Gametocyte | expressed | 0.20 | 0.87 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0323300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.131 | MFS: -3.005 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: O97301
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_106611
Most Similar Human Ortholog: Q8N8R5
TM-align score: 0.58 | RMSD: 3.58
Seq Identity: 0.23 | Length: 258 / 433
All Human Orthologs (OrthoMCL):
| Gene ID | Description |
|---|---|
| ENSG00000178074 | chromosome 2 open reading frame 69 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 8 | 7 | 19 |
| disruptive | 10 | 36 | 15 | 55 |
| missense | 6 | 31 | 15 | 50 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 19 | 15 | 25 |
| disruptive | 22 | 69 | 38 | 93 |
| missense | 13 | 57 | 33 | 78 |
PlasmoDB Total SNPs: 35
Non-coding: 0 | Synonymous: 24 | Nonsynonymous: 9 | Stop Codon: 2
Protein Length: 433 | Molecular Weight (kDa): 51.529
UniProt ID(s): O97301
PDB ID(s): None
Isoelectric Point: 6.19
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR018881 | Uncharacterised protein family UPF0565 |
| PFam | PF10561 | Uncharacterised protein family UPF0565 |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 10448855 | The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. | Bowman S, Lawson D, ..., Barrell BG | 10.1038/22964 |
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |