Product Description: zinc finger protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 1.38 | 0.45 |
Trophozoite | expressed | 1.17 | 0.43 |
Schizont | expressed | 0.59 | 0.68 |
Gametocyte | expressed | 1.00 | 0.50 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0403400
Resistome Missense Mutations: T609N
Resistome Compounds with Missense Mutations: AN13762
Resistome # Samples with Disruptive Mutations: 8 (2 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.936 | MFS: -2.787 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 52 | 229 | 110 | 250 |
disruptive | 269 | 672 | 383 | 803 |
missense | 148 | 512 | 325 | 640 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 93 | 431 | 178 | 256 |
disruptive | 451 | 1441 | 554 | 1178 |
missense | 237 | 1083 | 426 | 765 |
PlasmoDB Total SNPs: 681
Non-coding: 88 | Synonymous: 299 | Nonsynonymous: 293 | Stop Codon: 1
Protein Length: 3825 | Molecular Weight (kDa): 460.086
UniProt ID(s): C0H487
PDB ID(s): None
Isoelectric Point: 9.75
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR007309 | B-block binding subunit of TFIIIC |
InterPro | IPR013087 | Zinc finger C2H2-type |
PFam | PF04182 | B-block binding subunit of TFIIIC |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |