About Gene List

PF3D7_0403400

Genome location: Pf3D7_04_v3:181,969..194,734(+)

Genome classification: Core

Function and Localization

Product Description: zinc finger protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 2

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 1.38 0.45
Trophozoite expressed 1.17 0.43
Schizont expressed 0.59 0.68
Gametocyte expressed 1.00 0.50

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0403400

Resistome Missense Mutations: T609N

Resistome Compounds with Missense Mutations: AN13762

Resistome # Samples with Disruptive Mutations: 8 (2 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.936 | MFS: -2.787 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_160307

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 52 229 110 250
disruptive 269 672 383 803
missense 148 512 325 640

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 93 431 178 256
disruptive 451 1441 554 1178
missense 237 1083 426 765

PlasmoDB Total SNPs: 681

Non-coding: 88 | Synonymous: 299 | Nonsynonymous: 293 | Stop Codon: 1

Protein Information

Protein Length: 3825 | Molecular Weight (kDa): 460.086

UniProt ID(s): C0H487

PDB ID(s): None

Isoelectric Point: 9.75

Protein Domain Annotations:

Source Family ID Description
InterPro IPR007309 B-block binding subunit of TFIIIC
InterPro IPR013087 Zinc finger C2H2-type
PFam PF04182 B-block binding subunit of TFIIIC
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095