Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.05 | 0.97 |
Schizont | not expressed | 0.03 | 0.98 |
Gametocyte | not expressed | 0.12 | 0.93 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0404200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.126 | MFS: -3.009 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1001900)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I1Y7
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersOrthology to BindingDB Entries:
UniProt | Protein Name | Species | Homology Source | BindingDB Ligands |
---|---|---|---|---|
P53051 | Oligo-1,6-glucosidase IMA1 | OrthoMCL | 5-(hydroxymethyl)-2-(2-phenylethyl)-5H,6H,7H,8H- imidazo[1,2-a]pyridine-6,7,8-triol (Compound 2)2-(3,3-dimethylbutyl)-5-(hydroxymethyl)- 5H,6H,7H,8H-imidazo[1,2-a]pyridine-6,7,8-triol (Compound 3)5-(hydroxymethyl)-2-octyl-5H,6H,7H,8H-imidazo[1,2- a]pyridine-6,7,8-triol (Compound 4)5-(hydroxymethyl)-2-[3-(4-methylphenyl)propyl]- 5H,6H,7H,8H-imidazo[1,2-a]pyridine-6,7,8-triol (Compound 5)... | |
P53341 | Alpha-glucosidase MAL12 | Saccharomyces cerevisiae | OrthoMCL | Urea derivative, 11Urea derivative, 12Urea derivative, 13Urea derivative, 16... |
P38158 | Alpha-glucosidase MAL32 | OrthoMCL | GSK-3965Riccardin CPPS-33Riccardin C derivative, 20b... |
Ortholog Group (OrthoMCL): OG6_100402
Most Similar Human Ortholog: Q07837
TM-align score: 0.32 | RMSD: 5.75
Seq Identity: 0.05 | Length: 104 / 163
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000138079 | solute carrier family 3 member 1 |
Protein Length: 163 | Molecular Weight (kDa): 19.573
UniProt ID(s): Q8I1Y7
PDB ID(s): None
Isoelectric Point: 10.39
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 12 | 3 | 9 |
disruptive | 2 | 15 | 8 | 26 |
missense | 2 | 15 | 7 | 22 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 22 | 6 | 9 |
disruptive | 7 | 39 | 25 | 52 |
missense | 3 | 33 | 21 | 38 |
PlasmoDB Total SNPs: 61
Non-coding: 48 | Synonymous: 8 | Nonsynonymous: 5 | Stop Codon: 0
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |