Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | not expressed | 0.04 | 0.98 |
Trophozoite | not expressed | 0.05 | 0.97 |
Schizont | not expressed | 0.06 | 0.96 |
Gametocyte | possibly expressed | 0.41 | 0.77 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0407600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.501 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1005200)
Modification: Disrupted | RMgm-2722
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q9U0L0
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 62 | 34 | 63 |
disruptive | 56 | 278 | 112 | 284 |
missense | 31 | 219 | 90 | 224 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 27 | 125 | 50 | 86 |
disruptive | 119 | 565 | 194 | 511 |
missense | 67 | 423 | 145 | 288 |
PlasmoDB Total SNPs: 207
Non-coding: 0 | Synonymous: 95 | Nonsynonymous: 112 | Stop Codon: 0
Protein Length: 1212 | Molecular Weight (kDa): 142.862
UniProt ID(s): Q9U0L0
PDB ID(s): None
Isoelectric Point: 5.34
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |