About Gene List

PF3D7_0408000

Genome location: Pf3D7_04_v3:394,047..394,714(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.35 0.87
Trophozoite not expressed 0.03 0.98
Schizont not expressed 0.21 0.91
Gametocyte not expressed 0.14 0.92

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0408000

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.418 | MFS: -2.249 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q9U0K6

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533100

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 7 3 8
disruptive 8 21 4 28
missense 7 21 4 24

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 1 13 9 15
disruptive 14 36 12 43
missense 12 31 11 32

PlasmoDB Total SNPs: 24

Non-coding: 14 | Synonymous: 4 | Nonsynonymous: 6 | Stop Codon: 0

Protein Information

Protein Length: 171 | Molecular Weight (kDa): 20.863

UniProt ID(s): Q9U0K6

PDB ID(s): None

Isoelectric Point: 10.14

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095