About Gene List

PF3D7_0408200

Genome location: Pf3D7_04_v3:401,320..403,441(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.08 0.95
Trophozoite not expressed 0.06 0.97
Schizont not expressed 0.08 0.94
Gametocyte expressed 0.63 0.68

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0408200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.196 | MFS: -2.626 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q9U0K4

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_104916

Most Similar Human Ortholog: H0YND2

TM-align score: 0.86 | RMSD: 1.75

Seq Identity: 0.10 | Length: 102 / 622

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000151575 testis expressed 9

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 3 26 13 28
disruptive 15 68 44 113
missense 12 68 41 101

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 3 55 17 33
disruptive 34 156 80 153
missense 23 129 63 113

PlasmoDB Total SNPs: 80

Non-coding: 29 | Synonymous: 32 | Nonsynonymous: 19 | Stop Codon: 0

Protein Information

Protein Length: 622 | Molecular Weight (kDa): 73.277

UniProt ID(s): Q9U0K4

PDB ID(s): None

Isoelectric Point: 9.23

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095