Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.08 | 0.95 |
Trophozoite | not expressed | 0.06 | 0.97 |
Schizont | not expressed | 0.08 | 0.94 |
Gametocyte | expressed | 0.63 | 0.68 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0408200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.196 | MFS: -2.626 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q9U0K4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_104916
Most Similar Human Ortholog: H0YND2
TM-align score: 0.86 | RMSD: 1.75
Seq Identity: 0.10 | Length: 102 / 622
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000151575 | testis expressed 9 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 26 | 13 | 28 |
disruptive | 15 | 68 | 44 | 113 |
missense | 12 | 68 | 41 | 101 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 55 | 17 | 33 |
disruptive | 34 | 156 | 80 | 153 |
missense | 23 | 129 | 63 | 113 |
PlasmoDB Total SNPs: 80
Non-coding: 29 | Synonymous: 32 | Nonsynonymous: 19 | Stop Codon: 0
Protein Length: 622 | Molecular Weight (kDa): 73.277
UniProt ID(s): Q9U0K4
PDB ID(s): None
Isoelectric Point: 9.23
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |