Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 1.93 | 0.31 |
Trophozoite | expressed | 2.53 | 0.11 |
Schizont | expressed | 2.08 | 0.27 |
Gametocyte | expressed | 2.17 | 0.16 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0417400
Resistome Missense Mutations: I3027K, D5375N
Resistome Compounds with Missense Mutations: AN13762, Suloctidil
Resistome # Samples with Disruptive Mutations: 3 (2 missense, 1 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.17 | MFS: -2.817 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 63 | 213 | 122 | 278 |
disruptive | 460 | 801 | 348 | 972 |
missense | 255 | 525 | 274 | 711 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 100 | 415 | 199 | 360 |
disruptive | 818 | 1530 | 691 | 1511 |
missense | 400 | 993 | 508 | 987 |
PlasmoDB Total SNPs: 1057
Non-coding: 87 | Synonymous: 522 | Nonsynonymous: 446 | Stop Codon: 2
Protein Length: 6769 | Molecular Weight (kDa): 822.389
UniProt ID(s): C0H4B0
PDB ID(s): None
Isoelectric Point: 9.94
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |