About Gene List

PF3D7_0420500

Genome location: Pf3D7_04_v3:930,314..931,842(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 1

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.01 1.00
Trophozoite no data 0.06 0.96
Schizont no data 0.39 0.78
Gametocyte no data 0.41 0.76

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0420500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.962 | MFS: -0.762 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4B7

"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=0.27) with 5UJ7 (Global RMSD=8.81)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532795

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 6 5 7
disruptive 2 19 9 28
missense 2 17 8 26

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 14 7 10
disruptive 4 44 24 64
missense 3 33 20 40

PlasmoDB Total SNPs: 104

Non-coding: 96 | Synonymous: 7 | Nonsynonymous: 1 | Stop Codon: 0

Protein Information

Protein Length: 198 | Molecular Weight (kDa): 23.897

UniProt ID(s): C0H4B7

PDB ID(s): None

Isoelectric Point: 8.22

Protein Domain Annotations:

Source Family ID Description
InterPro IPR029021 Protein-tyrosine phosphatase-like
PFam N/A N/A
Superfamily SSF52799 Protein-tyrosine phosphatase-like

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095