Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.01 | 1.00 |
Trophozoite | no data | 0.06 | 0.96 |
Schizont | no data | 0.39 | 0.78 |
Gametocyte | no data | 0.41 | 0.76 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0420500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.962 | MFS: -0.762 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4B7
"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=0.27) with 5UJ7 (Global RMSD=8.81)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 6 | 5 | 7 |
disruptive | 2 | 19 | 9 | 28 |
missense | 2 | 17 | 8 | 26 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 14 | 7 | 10 |
disruptive | 4 | 44 | 24 | 64 |
missense | 3 | 33 | 20 | 40 |
PlasmoDB Total SNPs: 104
Non-coding: 96 | Synonymous: 7 | Nonsynonymous: 1 | Stop Codon: 0
Protein Length: 198 | Molecular Weight (kDa): 23.897
UniProt ID(s): C0H4B7
PDB ID(s): None
Isoelectric Point: 8.22
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR029021 | Protein-tyrosine phosphatase-like |
PFam | N/A | N/A |
Superfamily | SSF52799 | Protein-tyrosine phosphatase-like |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |