About Gene List

PF3D7_0423200

Genome location: Pf3D7_04_v3:1,050,249..1,051,258(+)

Genome classification: Core

Function and Localization

Product Description: BSD-domain protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 0.05 0.97
Trophozoite expressed 0.11 0.92
Schizont possibly expressed 0.10 0.93
Gametocyte not expressed 0.08 0.95

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0423200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -1.349 | #Insertions: 3

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IFN4

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_136486

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 4 4 7
disruptive 1 7 3 16
missense 1 7 3 14

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 2 13 6 8
disruptive 2 26 10 46
missense 2 19 7 29

PlasmoDB Total SNPs: 72

Non-coding: 68 | Synonymous: 2 | Nonsynonymous: 2 | Stop Codon: 0

Protein Information

Protein Length: 136 | Molecular Weight (kDa): 16.582

UniProt ID(s): Q8IFN4

PDB ID(s): None

Isoelectric Point: 5.82

Protein Domain Annotations:

Source Family ID Description
InterPro IPR005607 BSD domain
PFam PF03909 BSD domain
Superfamily SSF140383 N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095