Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.97 |
Trophozoite | expressed | 0.09 | 0.95 |
Schizont | expressed | 1.82 | 0.29 |
Gametocyte | expressed | 1.03 | 0.54 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0423300
Resistome Missense Mutations: L234Q, L240I
Resistome Compounds with Missense Mutations: AN13762
Resistome # Samples with Disruptive Mutations: 3 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.696 | MFS: -2.396 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IFN3
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 17 | 19 | 24 |
disruptive | 20 | 96 | 51 | 113 |
missense | 13 | 71 | 33 | 79 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 40 | 25 | 27 |
disruptive | 73 | 192 | 81 | 155 |
missense | 39 | 128 | 57 | 90 |
PlasmoDB Total SNPs: 128
Non-coding: 51 | Synonymous: 52 | Nonsynonymous: 25 | Stop Codon: 0
Protein Length: 476 | Molecular Weight (kDa): 58.351
UniProt ID(s): Q8IFN3
PDB ID(s): None
Isoelectric Point: 10.47
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |