Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.08 | 0.96 |
Trophozoite | expressed | 0.46 | 0.74 |
Schizont | possibly expressed | 0.17 | 0.88 |
Gametocyte | possibly expressed | 0.49 | 0.72 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0512500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.174 | MFS: -3.29 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I3Y1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 25 | 12 | 43 |
disruptive | 11 | 53 | 28 | 96 |
missense | 7 | 48 | 26 | 92 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 46 | 30 | 41 |
disruptive | 28 | 123 | 73 | 159 |
missense | 19 | 99 | 63 | 129 |
PlasmoDB Total SNPs: 158
Non-coding: 117 | Synonymous: 34 | Nonsynonymous: 7 | Stop Codon: 0
Protein Length: 817 | Molecular Weight (kDa): 99.177
UniProt ID(s): Q8I3Y1
PDB ID(s): None
Isoelectric Point: 9.74
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |