Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | possibly expressed | 0.01 | 1.00 |
Trophozoite | expressed | 0.02 | 0.99 |
Schizont | expressed | 0.02 | 0.99 |
Gametocyte | expressed | 0.84 | 0.63 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0514500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 0.596 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PBANKA_1114100)
Modification: Tagged | RMgm-1144
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4D9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 15 | 9 | 22 |
disruptive | 2 | 9 | 12 | 19 |
missense | 2 | 9 | 12 | 19 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 24 | 16 | 33 |
disruptive | 2 | 32 | 22 | 41 |
missense | 2 | 26 | 21 | 32 |
PlasmoDB Total SNPs: 77
Non-coding: 66 | Synonymous: 10 | Nonsynonymous: 1 | Stop Codon: 0
Protein Length: 215 | Molecular Weight (kDa): 25.233
UniProt ID(s): C0H4D9
PDB ID(s): None
Isoelectric Point: 8.19
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |