About Gene List

PF3D7_0523400

Genome location: Pf3D7_05_v3:973,038..976,138(+)

Genome classification: Core

Function and Localization

Product Description: DnaJ protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 2

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring possibly expressed 0.67 0.69
Trophozoite expressed 1.06 0.46
Schizont expressed 0.96 0.51
Gametocyte possibly expressed 1.05 0.45

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0523400

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.23 | MFS: -2.787 | #Insertions: 0

PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_1238200)

  • Relative Growth Rate: 0.78 ± 0.07
  • Confidence: 6.69

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1238200)

Modification: Disrupted | RMgm-3360

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I3N0

"Best" AlphaFill ligand hit: 1PS (3-pyridinium-1-ylpropane-1-sulfonate, Local RMSD=1.00) with 5AYK (Global RMSD=8.47)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_102152

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 17 15 31
disruptive 4 21 19 41
missense 3 21 19 30

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 7 56 23 24
disruptive 10 70 39 120
missense 7 49 30 71

PlasmoDB Total SNPs: 96

Non-coding: 81 | Synonymous: 12 | Nonsynonymous: 3 | Stop Codon: 0

Protein Information

Protein Length: 533 | Molecular Weight (kDa): 61.903

UniProt ID(s): Q8I3N0

PDB ID(s): None

Isoelectric Point: 8.02

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001623 DnaJ domain
InterPro IPR018253 DnaJ domain, conserved site
InterPro IPR026894 DNAJ-containing protein, X-domain
InterPro IPR036869 Chaperone J-domain superfamily
PFam PF00226 DnaJ domain
PFam PF14308 DNAJ-containing protein, X-domain
Superfamily SSF46565 Chaperone J-domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095