About Gene List

PF3D7_0523900

Genome location: Pf3D7_05_v3:992,760..997,375(-)

Genome classification: Core

Function and Localization

Product Description: MerC domain-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 4

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0016020 membrane

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring expressed 0.25 0.88
Trophozoite expressed 0.40 0.76
Schizont expressed 0.60 0.65
Gametocyte possibly expressed 0.77 0.58

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0523900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.399 | MFS: -2.243 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4G1

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_160212

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 186

Non-coding: 169 | Synonymous: 14 | Nonsynonymous: 3 | Stop Codon: 0

Protein Information

Protein Length: 203 | Molecular Weight (kDa): 23.339

UniProt ID(s): C0H4G1

PDB ID(s): None

Isoelectric Point: 8.32

Protein Domain Annotations:

Source Family ID Description
InterPro IPR004891 Mercury transport protein MerC
PFam PF03203 Mercury transport protein MerC
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095