Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.97 |
Trophozoite | not expressed | 0.39 | 0.76 |
Schizont | not expressed | 0.08 | 0.95 |
Gametocyte | expressed | 0.60 | 0.68 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0526100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.148 | MFS: -2.96 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I3K4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 25 | 7 | 26 |
disruptive | 7 | 43 | 32 | 56 |
missense | 6 | 39 | 29 | 53 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 39 | 13 | 25 |
disruptive | 22 | 103 | 55 | 71 |
missense | 12 | 85 | 48 | 57 |
PlasmoDB Total SNPs: 96
Non-coding: 54 | Synonymous: 29 | Nonsynonymous: 13 | Stop Codon: 0
Protein Length: 409 | Molecular Weight (kDa): 49.601
UniProt ID(s): Q8I3K4
PDB ID(s): None
Isoelectric Point: 9.38
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |