Product Description: conserved protein, unknown function
SignalP Peptide: MLYSLCLLYITIAKTLS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.02 | 0.99 |
| Trophozoite | possibly expressed | 0.01 | 1.00 |
| Schizont | possibly expressed | 0.01 | 0.99 |
| Gametocyte | expressed | 1.08 | 0.58 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0528900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.203 | MFS: -2.613 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4G6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 25 | 8 | 13 |
| disruptive | 3 | 20 | 20 | 59 |
| missense | 3 | 20 | 20 | 56 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 41 | 14 | 13 |
| disruptive | 4 | 66 | 35 | 68 |
| missense | 4 | 60 | 30 | 56 |
PlasmoDB Total SNPs: 201
Non-coding: 191 | Synonymous: 5 | Nonsynonymous: 5 | Stop Codon: 0
Protein Length: 228 | Molecular Weight (kDa): 26.891
UniProt ID(s): C0H4G6
PDB ID(s): None
Isoelectric Point: 7.08
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |