Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.07 | 0.97 |
Trophozoite | possibly expressed | 0.25 | 0.86 |
Schizont | possibly expressed | 1.03 | 0.52 |
Gametocyte | expressed | 0.61 | 0.69 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0531100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.184 | #Insertions: 13
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I3F7
"Best" AlphaFill ligand hit: GDP (guanosine-5'-diphosphate, Local RMSD=8.90) with 3CLV (Global RMSD=23.97)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 40 | 133 | 72 | 157 |
disruptive | 146 | 631 | 270 | 519 |
missense | 115 | 569 | 241 | 446 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 73 | 248 | 100 | 163 |
disruptive | 314 | 1049 | 347 | 642 |
missense | 232 | 894 | 288 | 463 |
PlasmoDB Total SNPs: 386
Non-coding: 42 | Synonymous: 173 | Nonsynonymous: 170 | Stop Codon: 1
Protein Length: 2698 | Molecular Weight (kDa): 325.264
UniProt ID(s): Q8I3F7
PDB ID(s): None
Isoelectric Point: 9.34
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR035969 | Rab-GTPase-TBC domain superfamily |
PFam | N/A | N/A |
Superfamily | SSF47923 | Rab-GTPase-TBC domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |