Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.37 | 0.82 |
Trophozoite | possibly expressed | 0.29 | 0.82 |
Schizont | expressed | 0.61 | 0.64 |
Gametocyte | expressed | 0.37 | 0.78 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0602900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.752 | MFS: -2.983 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KSM9
"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=16.00) with 1DEJ (Global RMSD=29.16)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 22 | 11 | 21 |
disruptive | 11 | 60 | 22 | 67 |
missense | 8 | 53 | 22 | 59 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 39 | 16 | 28 |
disruptive | 17 | 127 | 53 | 130 |
missense | 11 | 113 | 42 | 78 |
PlasmoDB Total SNPs: 149
Non-coding: 112 | Synonymous: 24 | Nonsynonymous: 12 | Stop Codon: 1
Protein Length: 470 | Molecular Weight (kDa): 56.371
UniProt ID(s): C6KSM9
PDB ID(s): None
Isoelectric Point: 9.45
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |