About Gene List

PF3D7_0603900

Genome location: Pf3D7_06_v3:160,825..162,616(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.01 1.00
Trophozoite no data 0.05 0.97
Schizont no data 0.08 0.95
Gametocyte no data 0.71 0.63

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0603900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -1.638 | #Insertions: 3

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KSN7

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_122808

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 18 8 19
disruptive 7 25 16 49
missense 7 25 15 47

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 32 15 18
disruptive 15 69 34 81
missense 9 58 31 63

PlasmoDB Total SNPs: 73

Non-coding: 54 | Synonymous: 8 | Nonsynonymous: 11 | Stop Codon: 0

Protein Information

Protein Length: 375 | Molecular Weight (kDa): 45.172

UniProt ID(s): C6KSN7

PDB ID(s): None

Isoelectric Point: 9.87

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095