Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.01 | 1.00 |
Trophozoite | no data | 0.05 | 0.97 |
Schizont | no data | 0.08 | 0.95 |
Gametocyte | no data | 0.71 | 0.63 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0603900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.638 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KSN7
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 18 | 8 | 19 |
disruptive | 7 | 25 | 16 | 49 |
missense | 7 | 25 | 15 | 47 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 32 | 15 | 18 |
disruptive | 15 | 69 | 34 | 81 |
missense | 9 | 58 | 31 | 63 |
PlasmoDB Total SNPs: 73
Non-coding: 54 | Synonymous: 8 | Nonsynonymous: 11 | Stop Codon: 0
Protein Length: 375 | Molecular Weight (kDa): 45.172
UniProt ID(s): C6KSN7
PDB ID(s): None
Isoelectric Point: 9.87
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |