About Gene List

PF3D7_0605400

Genome location: Pf3D7_06_v3:224,446..225,095(-)

Genome classification: Core

Function and Localization

Product Description: calcium-binding protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.00 1.00
Trophozoite not expressed 0.01 0.99
Schizont not expressed 0.01 0.99
Gametocyte possibly expressed 0.20 0.88

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0605400

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS *tentative

MIS: 0.166 | MFS: -2.774 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KSQ2

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_116928

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 8 4 10
disruptive 5 11 6 21
missense 5 11 6 19

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 1 16 5 11
disruptive 5 21 12 30
missense 5 20 11 23

PlasmoDB Total SNPs: 17

Non-coding: 12 | Synonymous: 2 | Nonsynonymous: 3 | Stop Codon: 0

Protein Information

Protein Length: 160 | Molecular Weight (kDa): 19.006

UniProt ID(s): C6KSQ2

PDB ID(s): None

Isoelectric Point: 4.76

Protein Domain Annotations:

Source Family ID Description
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand domain pair
PFam PF13499 EF-hand domain
Superfamily SSF47473 EF-hand domain pair

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095