Product Description: heptatricopeptide repeat-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.16 | 0.92 |
Trophozoite | expressed | 0.88 | 0.55 |
Schizont | expressed | 0.14 | 0.92 |
Gametocyte | expressed | 0.94 | 0.52 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0608300
Resistome Missense Mutations: Q1357K
Resistome Compounds with Missense Mutations: AN13762
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.132 | MFS: -3.232 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0106900)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KST1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 18 | 38 | 37 | 81 |
disruptive | 76 | 161 | 81 | 198 |
missense | 51 | 112 | 65 | 165 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 24 | 102 | 53 | 86 |
disruptive | 151 | 332 | 145 | 328 |
missense | 87 | 234 | 107 | 204 |
PlasmoDB Total SNPs: 250
Non-coding: 49 | Synonymous: 84 | Nonsynonymous: 117 | Stop Codon: 0
Protein Length: 1431 | Molecular Weight (kDa): 171.022
UniProt ID(s): A0A0N7EJ21, C6KST1
PDB ID(s): None
Isoelectric Point: 9.54
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |