Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MRLFFLFSMFLIKCATS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.01 | 1.00 |
| Trophozoite | not expressed | 0.01 | 0.99 |
| Schizont | not expressed | 0.04 | 0.97 |
| Gametocyte | not expressed | 0.21 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0609500
Resistome Missense Mutations: S297F, D803N
Resistome Compounds with Missense Mutations: DSM1, Suloctidil
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 1 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.971 | MFS: -2.682 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KSU2
"Best" AlphaFill ligand hit: PAL (n-(phosphonacetyl)-l-aspartic acid, Local RMSD=7.11) with 4BJH (Global RMSD=14.79)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 11 | 42 | 24 | 50 |
| disruptive | 10 | 55 | 37 | 110 |
| missense | 10 | 53 | 37 | 103 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 17 | 84 | 39 | 56 |
| disruptive | 23 | 145 | 88 | 165 |
| missense | 18 | 124 | 82 | 131 |
PlasmoDB Total SNPs: 179
Non-coding: 121 | Synonymous: 48 | Nonsynonymous: 10 | Stop Codon: 0
Protein Length: 1067 | Molecular Weight (kDa): 126.92
UniProt ID(s): C6KSU2
PDB ID(s): None
Isoelectric Point: 8.43
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |