About Gene List

PF3D7_0609500

Genome location: Pf3D7_06_v3:402,722..407,242(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: MRLFFLFSMFLIKCATS

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 1.00
Trophozoite not expressed 0.01 0.99
Schizont not expressed 0.04 0.97
Gametocyte not expressed 0.21 0.88

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0609500

Resistome Missense Mutations: S297F, D803N

Resistome Compounds with Missense Mutations: DSM1, Suloctidil

Resistome # Samples with Disruptive Mutations: 2 (2 missense, 1 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.971 | MFS: -2.682 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KSU2

"Best" AlphaFill ligand hit: PAL (n-(phosphonacetyl)-l-aspartic acid, Local RMSD=7.11) with 4BJH (Global RMSD=14.79)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532386

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 11 42 24 50
disruptive 10 55 37 110
missense 10 53 37 103

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 17 84 39 56
disruptive 23 145 88 165
missense 18 124 82 131

PlasmoDB Total SNPs: 179

Non-coding: 121 | Synonymous: 48 | Nonsynonymous: 10 | Stop Codon: 0

Protein Information

Protein Length: 1067 | Molecular Weight (kDa): 126.92

UniProt ID(s): C6KSU2

PDB ID(s): None

Isoelectric Point: 8.43

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095