About Gene List

PF3D7_0611500

Genome location: Pf3D7_06_v3:482,825..483,907(-)

Genome classification: Core

Function and Localization

Product Description: EF hand domain-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0045177 apical part of cell

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.01 0.99
Trophozoite no data 0.02 0.99
Schizont no data 0.08 0.95
Gametocyte no data 0.26 0.84

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0611500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.506 | MFS: -2.827 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0109800)

Modification: Tagged | RMgm-4951

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KSW0

"Best" AlphaFill ligand hit: PH2 (2-amino-6-hydroxymethyl-7,8-dihydro-3h-pteridin-4-one, Local RMSD=2.70) with 6JWR (Global RMSD=19.81)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_148525

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 3 10 8 15
disruptive 2 10 15 34
missense 2 10 15 30

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 35 4 11
disruptive 4 45 39 43
missense 4 42 31 28

PlasmoDB Total SNPs: 13

Non-coding: 0 | Synonymous: 11 | Nonsynonymous: 2 | Stop Codon: 0

Protein Information

Protein Length: 360 | Molecular Weight (kDa): 43.035

UniProt ID(s): C6KSW0

PDB ID(s): None

Isoelectric Point: 6.69

Protein Domain Annotations:

Source Family ID Description
InterPro IPR011992 EF-hand domain pair
PFam N/A N/A
Superfamily SSF47473 EF-hand domain pair

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095
29269729 A conserved ankyrin repeat-containing protein regulates conoid stability,motility and cell invasion in Toxoplasma gondii. Long S, Anthony B, Drewry LL, Sibley LD 10.1038/s41467-017-02341-2