Product Description: EF hand domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0045177 | apical part of cell |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.01 | 0.99 |
Trophozoite | no data | 0.02 | 0.99 |
Schizont | no data | 0.08 | 0.95 |
Gametocyte | no data | 0.26 | 0.84 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0611500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.506 | MFS: -2.827 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0109800)
Modification: Tagged | RMgm-4951
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KSW0
"Best" AlphaFill ligand hit: PH2 (2-amino-6-hydroxymethyl-7,8-dihydro-3h-pteridin-4-one, Local RMSD=2.70) with 6JWR (Global RMSD=19.81)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 10 | 8 | 15 |
disruptive | 2 | 10 | 15 | 34 |
missense | 2 | 10 | 15 | 30 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 35 | 4 | 11 |
disruptive | 4 | 45 | 39 | 43 |
missense | 4 | 42 | 31 | 28 |
PlasmoDB Total SNPs: 13
Non-coding: 0 | Synonymous: 11 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 360 | Molecular Weight (kDa): 43.035
UniProt ID(s): C6KSW0
PDB ID(s): None
Isoelectric Point: 6.69
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR011992 | EF-hand domain pair |
PFam | N/A | N/A |
Superfamily | SSF47473 | EF-hand domain pair |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
29269729 | A conserved ankyrin repeat-containing protein regulates conoid stability,motility and cell invasion in Toxoplasma gondii. | Long S, Anthony B, Drewry LL, Sibley LD | 10.1038/s41467-017-02341-2 |