Product Description: F-box protein FBXO6, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.03 | 0.98 |
Trophozoite | no data | 0.04 | 0.98 |
Schizont | no data | 0.55 | 0.73 |
Gametocyte | no data | 0.69 | 0.63 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0614700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.208 | MFS: -2.728 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KSY8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 26 | 12 | 41 |
disruptive | 9 | 53 | 30 | 93 |
missense | 6 | 43 | 24 | 67 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 53 | 22 | 56 |
disruptive | 31 | 123 | 106 | 221 |
missense | 16 | 89 | 66 | 114 |
PlasmoDB Total SNPs: 156
Non-coding: 102 | Synonymous: 36 | Nonsynonymous: 18 | Stop Codon: 0
Protein Length: 604 | Molecular Weight (kDa): 72.444
UniProt ID(s): C6KSY8
PDB ID(s): None
Isoelectric Point: 9.74
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR001810 | F-box domain |
InterPro | IPR036047 | F-box-like domain superfamily |
PFam | PF00646 | F-box domain |
Superfamily | SSF81383 | F-box-like domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |