About Gene List

PF3D7_0614700

Genome location: Pf3D7_06_v3:612,082..614,491(+)

Genome classification: Core

Function and Localization

Product Description: F-box protein FBXO6, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.03 0.98
Trophozoite no data 0.04 0.98
Schizont no data 0.55 0.73
Gametocyte no data 0.69 0.63

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0614700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.208 | MFS: -2.728 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KSY8

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533410

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 26 12 41
disruptive 9 53 30 93
missense 6 43 24 67

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 9 53 22 56
disruptive 31 123 106 221
missense 16 89 66 114

PlasmoDB Total SNPs: 156

Non-coding: 102 | Synonymous: 36 | Nonsynonymous: 18 | Stop Codon: 0

Protein Information

Protein Length: 604 | Molecular Weight (kDa): 72.444

UniProt ID(s): C6KSY8

PDB ID(s): None

Isoelectric Point: 9.74

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001810 F-box domain
InterPro IPR036047 F-box-like domain superfamily
PFam PF00646 F-box domain
Superfamily SSF81383 F-box-like domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095