About Gene List

PF3D7_0618800

Genome location: Pf3D7_06_v3:779,480..783,561(-)

Genome classification: Core

Function and Localization

Product Description: heptatricopeptide repeat-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 2

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.06 0.97
Trophozoite no data 0.51 0.70
Schizont no data 0.17 0.88
Gametocyte no data 0.56 0.69

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0618800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 4 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.13 | MFS: -3.169 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KT28

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_133807

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 9 42 32 64
disruptive 30 125 70 179
missense 12 89 63 148

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 13 95 47 85
disruptive 78 281 141 311
missense 35 205 112 230

PlasmoDB Total SNPs: 128

Non-coding: 53 | Synonymous: 49 | Nonsynonymous: 26 | Stop Codon: 0

Protein Information

Protein Length: 1025 | Molecular Weight (kDa): 123.082

UniProt ID(s): C6KT28

PDB ID(s): None

Isoelectric Point: 9.87

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095