About Gene List

PF3D7_0619800

Genome location: Pf3D7_06_v3:830,916..839,790(-)

Genome classification: Core

Function and Localization

Product Description: WD repeat-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 6

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0044228 host cell surface
Function GO:0042393 histone binding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.35 0.83
Trophozoite no data 0.81 0.57
Schizont no data 0.41 0.76
Gametocyte no data 0.37 0.79

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0619800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.129 | MFS: -2.918 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KT38

"Best" AlphaFill ligand hit: GTX (s-hexylglutathione, Local RMSD=2.06) with 1Q4J (Global RMSD=24.12)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532926

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 24 90 63 135
disruptive 102 415 215 502
missense 72 366 189 441

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 38 172 103 160
disruptive 201 848 367 686
missense 127 694 304 497

PlasmoDB Total SNPs: 346

Non-coding: 47 | Synonymous: 140 | Nonsynonymous: 141 | Stop Codon: 18

Protein Information

Protein Length: 2530 | Molecular Weight (kDa): 307.492

UniProt ID(s): C6KT38

PDB ID(s): None

Isoelectric Point: 9.74

Protein Domain Annotations:

Source Family ID Description
InterPro IPR036322 WD40-repeat-containing domain superfamily
PFam N/A N/A
Superfamily SSF50978 WD40-repeat-containing domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095
29162636 Quantitative Proteomic Profiling Reveals Novel Plasmodium falciparum SurfaceAntigens and Possible Vaccine Candidates. Nilsson Bark SK, Ahmad R, ..., Marti M 10.1074/mcp.RA117.000076