About Gene List

PF3D7_0620200

Genome location: Pf3D7_06_v3:846,523..848,013(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 1

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.00 1.00
Trophozoite no data 0.01 1.00
Schizont no data 0.06 0.96
Gametocyte no data 0.09 0.94

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0620200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.139 | MFS: -2.852 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KT42

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532603

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 7 4 9
disruptive 7 16 11 35
missense 4 12 10 30

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 1 15 12 19
disruptive 10 60 29 73
missense 6 41 26 48

PlasmoDB Total SNPs: 80

Non-coding: 17 | Synonymous: 37 | Nonsynonymous: 26 | Stop Codon: 0

Protein Information

Protein Length: 323 | Molecular Weight (kDa): 39.043

UniProt ID(s): C6KT42

PDB ID(s): None

Isoelectric Point: 7.13

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095