Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.04 | 0.98 |
Trophozoite | no data | 0.11 | 0.93 |
Schizont | no data | 0.53 | 0.70 |
Gametocyte | no data | 0.09 | 0.94 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0620300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.946 | MFS: -2.644 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KT43
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 32 | 19 | 55 |
disruptive | 18 | 93 | 71 | 156 |
missense | 18 | 89 | 68 | 139 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 62 | 37 | 66 |
disruptive | 31 | 252 | 130 | 274 |
missense | 25 | 211 | 116 | 179 |
PlasmoDB Total SNPs: 56
Non-coding: 20 | Synonymous: 19 | Nonsynonymous: 17 | Stop Codon: 0
Protein Length: 819 | Molecular Weight (kDa): 98.971
UniProt ID(s): C6KT43
PDB ID(s): None
Isoelectric Point: 9.83
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |