About Gene List

PF3D7_0620700

Genome location: Pf3D7_06_v3:858,689..860,721(-)

Genome classification: Core

Function and Localization

Product Description: DnaJ protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005739 mitochondrion
Process GO:0042407 cristae formation

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.06 0.97
Trophozoite possibly expressed 0.28 0.83
Schizont possibly expressed 1.11 0.43
Gametocyte expressed 0.95 0.56

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0620700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.18 | MFS: -3.42 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KT47

"Best" AlphaFill ligand hit: ADP (adenosine-5'-diphosphate, Local RMSD=0.92) with 8BNS (Global RMSD=12.18)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_139470

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 10 9 28
disruptive 8 31 23 49
missense 8 30 20 44

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 5 28 22 23
disruptive 14 78 42 115
missense 12 63 37 71

PlasmoDB Total SNPs: 99

Non-coding: 78 | Synonymous: 11 | Nonsynonymous: 8 | Stop Codon: 2

Protein Information

Protein Length: 362 | Molecular Weight (kDa): 42.792

UniProt ID(s): C6KT47

PDB ID(s): None

Isoelectric Point: 8.7

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001623 DnaJ domain
InterPro IPR024586 DnaJ-like protein C11, C-terminal
InterPro IPR036869 Chaperone J-domain superfamily
PFam PF11875 DnaJ-like protein C11, C-terminal
Superfamily SSF46565 Chaperone J-domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095