Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.10 | 0.95 |
Trophozoite | not expressed | 0.11 | 0.94 |
Schizont | not expressed | 0.21 | 0.87 |
Gametocyte | expressed | 0.55 | 0.71 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0622100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.998 | MFS: -2.104 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1121000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1121000)
Modification: Disrupted | RMgm-3039
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KT58
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 51 | 40 | 88 |
disruptive | 49 | 196 | 121 | 250 |
missense | 24 | 139 | 105 | 204 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 17 | 122 | 66 | 96 |
disruptive | 113 | 378 | 186 | 348 |
missense | 56 | 280 | 143 | 240 |
PlasmoDB Total SNPs: 208
Non-coding: 82 | Synonymous: 56 | Nonsynonymous: 70 | Stop Codon: 0
Protein Length: 1340 | Molecular Weight (kDa): 160.29
UniProt ID(s): C6KT58
PDB ID(s): None
Isoelectric Point: 8.33
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |