Product Description: CPW-WPC family protein
SignalP Peptide: MNYLSSFFCLILFLLYLNFCAC
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | no data | N/A | N/A |
| Ring | no data | 0.01 | 1.00 |
| Trophozoite | no data | 0.02 | 0.99 |
| Schizont | no data | 0.03 | 0.98 |
| Gametocyte | no data | 0.87 | 0.62 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0624300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.565 | MFS: -2.48 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KT79
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 3 | 7 | 7 | 12 |
| disruptive | 4 | 21 | 9 | 20 |
| missense | 4 | 20 | 9 | 20 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 22 | 13 | 8 |
| disruptive | 8 | 34 | 26 | 57 |
| missense | 7 | 29 | 20 | 37 |
PlasmoDB Total SNPs: 131
Non-coding: 118 | Synonymous: 7 | Nonsynonymous: 6 | Stop Codon: 0
Protein Length: 185 | Molecular Weight (kDa): 22.109
UniProt ID(s): C6KT79
PDB ID(s): None
Isoelectric Point: 9.2
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR006387 | CPW-WPC domain |
| PFam | PF09717 | CPW-WPC domain |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |