About Gene List

PF3D7_0627000

Genome location: Pf3D7_06_v3:1,084,110..1,087,609(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.07 0.96
Trophozoite no data 0.04 0.98
Schizont no data 0.02 0.99
Gametocyte no data 0.43 0.76

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0627000

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS *tentative

MIS: 0.991 | MFS: -2.321 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6KTA6

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_105653

Most Similar Human Ortholog: Q96C74

TM-align score: 0.34 | RMSD: 3.17

Seq Identity: 0.19 | Length: 53 / 110

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000145491 rhophilin associated tail protein 1 like

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 0 0 0 0
disruptive 0 0 0 0
missense 0 0 0 0

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 0 0 0 0
disruptive 0 0 0 2
missense 0 0 0 0

PlasmoDB Total SNPs: 162

Non-coding: 155 | Synonymous: 5 | Nonsynonymous: 1 | Stop Codon: 1

Protein Information

Protein Length: 110 | Molecular Weight (kDa): 13.193

UniProt ID(s): C6KTA6

PDB ID(s): None

Isoelectric Point: 5.01

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095