Product Description: ankyrin-repeat protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 1.96 | 0.28 |
Trophozoite | not expressed | 1.23 | 0.40 |
Schizont | not expressed | 1.43 | 0.33 |
Gametocyte | not expressed | 1.27 | 0.42 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0627100
Resistome Missense Mutations: Q283K, T600S, F1409L, W1458C
Resistome Compounds with Missense Mutations: MMV024101, MMV407834, MMV665928, MMV982556
Resistome # Samples with Disruptive Mutations: 7 (6 missense, 2 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.143 | MFS: -3.205 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KTA7
"Best" AlphaFill ligand hit: COA (coenzyme a, Local RMSD=0.01) with 3Q9N (Global RMSD=1.97)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 76 | 40 | 104 |
disruptive | 37 | 124 | 79 | 194 |
missense | 19 | 95 | 63 | 161 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 19 | 148 | 70 | 145 |
disruptive | 84 | 286 | 135 | 369 |
missense | 39 | 221 | 106 | 247 |
PlasmoDB Total SNPs: 235
Non-coding: 133 | Synonymous: 69 | Nonsynonymous: 33 | Stop Codon: 0
Protein Length: 1712 | Molecular Weight (kDa): 198.278
UniProt ID(s): C6KTA7
PDB ID(s): None
Isoelectric Point: 6.74
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR002110 | Ankyrin repeat |
InterPro | IPR020683 | Ankyrin repeat-containing domain |
InterPro | IPR036770 | Ankyrin repeat-containing domain superfamily |
PFam | PF12796 | Ankyrin repeat-containing domain |
Superfamily | SSF48403 | Ankyrin repeat-containing domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |