Genome location: Pf3D7_06_v3:1,169,270..1,174,371(-)
Genome classification: Core
Product Description: choline/ethanolaminephosphotransferase, putative
SignalP Peptide: N/A
# Transmembrane Domains: 8
EC Numbers: 2.7.8.1 (Ethanolaminephosphotransferase);2.7.8.2 (Diacylglycerol cholinephosphotransferase)
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005783 | endoplasmic reticulum |
Function | GO:0003723 | RNA binding |
Function | GO:0005515 | protein binding |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | nd | nd |
Trophozoite | no data | nd | nd |
Schizont | no data | nd | nd |
Gametocyte | no data | nd | nd |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0628300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.124 | MFS: -2.917 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1127000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1127000)
Modification: Tagged | RMgm-340
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6KTB9
"Best" AlphaFill ligand hit: No AlphaFill hits
BRENDA EC Inhibitors:
Orthology to BindingDB Entries:
UniProt | Protein Name | Species | Homology Source | BindingDB Ligands |
---|---|---|---|---|
Q9Y6K0 | Choline/ethanolaminephosphotransferase 1 | OrthoDB | CHEMBL260011CHEMBL261273CHEMBL260010CHEMBL260591... |
Ortholog Group (OrthoMCL): OG6_100740
Most Similar Human Ortholog: Q9Y6K0
TM-align score: 0.86 | RMSD: 2.34
Seq Identity: 0.23 | Length: 363 / 391
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000134255 | choline/ethanolamine phosphotransferase 1 |
Protein Length: 391 | Molecular Weight (kDa): 45.082
UniProt ID(s): C6KTB9
PDB ID(s): None
Isoelectric Point: 9.72
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR000462 | CDP-alcohol phosphatidyltransferase |
InterPro | IPR014472 | Choline/ethanolamine phosphotransferase |
PFam | PF01066 | CDP-alcohol phosphatidyltransferase |
Superfamily | N/A | N/A |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 11 | 11 | 23 |
disruptive | 1 | 5 | 2 | 20 |
missense | 1 | 5 | 2 | 16 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 41 | 13 | 41 |
disruptive | 2 | 32 | 31 | 84 |
missense | 2 | 19 | 27 | 64 |
PlasmoDB Total SNPs: 323
Non-coding: 300 | Synonymous: 21 | Nonsynonymous: 2 | Stop Codon: 0
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |