About Gene List

PF3D7_0702900

Genome location: Pf3D7_07_v3:112,576..114,405(-)

Genome classification: Core

Function and Localization

Product Description: centrin, putative

SignalP Peptide: MKLHVSLLYFFFLFLTFFNILKA

# Transmembrane Domains: 1

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Function GO:0005515 protein binding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.03 0.98
Trophozoite not expressed 0.09 0.94
Schizont possibly expressed 0.02 0.98
Gametocyte expressed 0.09 0.94

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0702900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.269 | MFS: -1.176 | #Insertions: 1

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0800600)

  • Relative Growth Rate: 0.98 ± 0.13
  • Confidence: 5.47

RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PbANKA_0800600)

Modification: Disrupted | RMgm-4958

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4K1

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_127054

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 137

Non-coding: 130 | Synonymous: 2 | Nonsynonymous: 5 | Stop Codon: 0

Protein Information

Protein Length: 107 | Molecular Weight (kDa): 12.639

UniProt ID(s): C0H4K1

PDB ID(s): None

Isoelectric Point: 4.11

Protein Domain Annotations:

Source Family ID Description
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand domain pair
InterPro IPR018247 EF-Hand 1, calcium-binding site
InterPro IPR019577 SPARC/Testican, calcium-binding domain
PFam PF10591 SPARC/Testican, calcium-binding domain
Superfamily SSF47473 EF-hand domain pair

Associated Publications

PMID Title Authors DOI/Link
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104
33515807 Systematic Identification of Plasmodium Falciparum Sporozoite Membrane ProteinInteractions Reveals an Essential Role for the p24 Complex in Host Infection. Knockel J, Dundas K, ..., Wright GJ 10.1074/mcp.RA120.002432