About Gene List

PF3D7_0703900

Genome location: Pf3D7_07_v3:153,119..167,024(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium membrane protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 11

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0016020 membrane
Component GO:0005634 nucleus
Function GO:0050699 WW domain binding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 1.44 0.42
Trophozoite expressed 1.18 0.44
Schizont expressed 0.44 0.77
Gametocyte not expressed 1.16 0.44

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0703900

Resistome Missense Mutations: G1758R

Resistome Compounds with Missense Mutations: MMV006901, MMV407834, OSM-S-106

Resistome # Samples with Disruptive Mutations: 18 (17 missense, 17 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.12 | MFS: -2.992 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_0801600)

Modification: Other | RMgm-468

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532527

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 61 197 124 236
disruptive 249 755 473 949
missense 172 643 427 820

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 95 389 161 322
disruptive 444 1648 646 1223
missense 283 1321 547 868

PlasmoDB Total SNPs: 702

Non-coding: 72 | Synonymous: 294 | Nonsynonymous: 336 | Stop Codon: 0

Protein Information

Protein Length: 4358 | Molecular Weight (kDa): 529.367

UniProt ID(s): A0A143ZY62

PDB ID(s): None

Isoelectric Point: 8.66

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315